antiProfilesData
Normal colon and cancer preprocessed affy data for antiProfile building.
Bioconductor version: Release (3.19)
Colon normal tissue and cancer samples used in Corrada Bravo, et al. gene expression anti-profiles paper: BMC Bioinformatics 2012, 13:272 doi:10.1186/1471-2105-13-272. Measurements are z-scores obtained from the GeneExpression Barcode in the 'frma' package
Author: Hector Corrada Bravo, Matthew McCall and Rafael A. Irizarry
Maintainer: Hector Corrada Bravo <hcorrada at gmail.com>
Citation (from within R, enter
citation("antiProfilesData")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("antiProfilesData")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | CancerData, ColonCancerData, ExperimentData, MicroarrayData, Tissue |
| Version | 1.40.0 |
| License | Artistic-2.0 |
| Depends | Biobase |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | frma, GEOquery, GEOmetadb |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | antiProfiles, epivizrChart, epivizr, messina |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | antiProfilesData_1.40.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/antiProfilesData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/antiProfilesData |
| Package Short Url | https://bioconductor.org/packages/antiProfilesData/ |
| Package Downloads Report | Download Stats |