KCsmart

DOI: 10.18129/B9.bioc.KCsmart    

Multi sample aCGH analysis package using kernel convolution

Bioconductor version: Release (3.6)

Multi sample aCGH analysis package using kernel convolution

Author: Jorma de Ronde, Christiaan Klijn, Arno Velds

Maintainer: Jorma de Ronde <j.d.ronde at nki.nl>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("KCsmart")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("KCsmart")

 

PDF	R Script	KCsmart example session
PDF		Reference Manual

Details

biocViews	CopyNumberVariation, Microarray, Software, Visualization, aCGH
Version	2.36.0
In Bioconductor since	BioC 2.3 (R-2.8) (9.5 years)
License	GPL-3
Depends	siggenes, multtest, KernSmooth
Imports	methods, BiocGenerics
LinkingTo
Suggests
SystemRequirements
Enhances	Biobase, CGHbase
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	KCsmart_2.36.0.tar.gz
Windows Binary	KCsmart_2.36.0.zip
Mac OS X 10.11 (El Capitan)	KCsmart_2.36.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/KCsmart
Package Short Url	http://bioconductor.org/packages/KCsmart/
Package Downloads Report	Download Stats