ProCoNA

DOI: 10.18129/B9.bioc.ProCoNA    

Protein co-expression network analysis (ProCoNA).

Bioconductor version: Release (3.6)

Protein co-expression network construction using peptide level data, with statisical analysis. (Journal of Clinical Bioinformatics 2013, 3:11 doi:10.1186/2043-9113-3-11)

Author: David L Gibbs

Maintainer: David L Gibbs <gibbsd at ohsu.edu>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ProCoNA")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ProCoNA")

 

PDF	R Script	De Novo Peptide Network Example
PDF		Reference Manual
Text		README
Text		NEWS

Details

biocViews	GraphAndNetwork, Proteomics, Software
Version	1.16.0
In Bioconductor since	BioC 2.13 (R-3.0) (4.5 years)
License	GPL (>= 2)
Depends	R (>= 2.10), methods, WGCNA, MSnbase, flashClust
Imports	BiocGenerics, GOstats
LinkingTo
Suggests	RUnit
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ProCoNA_1.16.0.tar.gz
Windows Binary	ProCoNA_1.16.0.zip
Mac OS X 10.11 (El Capitan)	ProCoNA_1.16.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/ProCoNA
Package Short Url	http://bioconductor.org/packages/ProCoNA/
Package Downloads Report	Download Stats