frma

DOI: 10.18129/B9.bioc.frma    

Frozen RMA and Barcode

Bioconductor version: Release (3.6)

Preprocessing and analysis for single microarrays and microarray batches.

Author: Matthew N. McCall <mccallm at gmail.com>, Rafael A. Irizarry <rafa at jhu.edu>, with contributions from Terry Therneau

Maintainer: Matthew N. McCall <mccallm at gmail.com>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("frma")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("frma")

 

PDF	R Script	frma: Preprocessing for single arrays and array batches
PDF		Reference Manual
Text		NEWS

Details

biocViews	Microarray, Preprocessing, Software
Version	1.30.1
In Bioconductor since	BioC 2.6 (R-2.11) (8 years)
License	GPL (>= 2)
Depends	R (>= 2.10.0), Biobase(>= 2.6.0)
Imports	Biobase, MASS, DBI, affy, methods, oligo, oligoClasses, preprocessCore, utils, BiocGenerics
LinkingTo
Suggests	hgu133afrmavecs, frmaExampleData
SystemRequirements
Enhances
URL	http://bioconductor.org
Depends On Me
Imports Me	ChIPXpress, DeSousa2013
Suggests Me	antiProfilesData, frmaTools
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	frma_1.30.1.tar.gz
Windows Binary	frma_1.30.1.zip
Mac OS X 10.11 (El Capitan)	frma_1.30.1.tgz
Source Repository	git clone https://git.bioconductor.org/packages/frma
Package Short Url	http://bioconductor.org/packages/frma/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.6	Source Archive