phastCons100way.UCSC.hg19

DOI: 10.18129/B9.bioc.phastCons100way.UCSC.hg19    

UCSC phastCons conservation scores for hg19

Bioconductor version: Release (3.6)

Store UCSC phastCons conservation scores for the human genome (hg19) calculated from multiple alignments with other 99 vertebrate species.

Author: Robert Castelo

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("phastCons100way.UCSC.hg19")

Documentation

PDF		Reference Manual
Text		NEWS

Details

biocViews	AnnotationData, Genetics, GenomicScores, Homo_sapiens
Version	3.6.0
License	Artistic-2.0
Depends	R (>= 3.0.0), GenomicScores(>= 1.0.0)
Imports	utils, S4Vectors, IRanges, GenomicRanges, BSgenome
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	RareVariantVis
Suggests Me	ATACseqQC, GenomicScores, VariantFiltering

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	phastCons100way.UCSC.hg19_3.6.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url	http://bioconductor.org/packages/phastCons100way.UCSC.hg19/
Package Downloads Report	Download Stats