RnaSeqSampleSizeData

DOI: 10.18129/B9.bioc.RnaSeqSampleSizeData    

RnaSeqSampleSizeData

Bioconductor version: Release (3.6)

RnaSeqSampleSizeData package provides the read counts and dispersion distribution from real RNA-seq experiments. It can be used by RnaSeqSampleSize package to estimate sample size and power for RNA-seq experiment design.

Author: Shilin Zhao, Chung-I Li, Yan Guo, Quanhu Sheng, Yu Shyr

Maintainer: Shilin Zhao <zhaoshilin at gmail.com>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RnaSeqSampleSizeData")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RnaSeqSampleSizeData")

 

PDF	R Script	RnaSeqSampleSizeData: Read counts and dispersion distribution from real data for sample size estimation of RNA-seq experiments
PDF		Reference Manual
Text		NEWS

Details

biocViews	CancerData, ExperimentData, RNASeqData
Version	1.10.0
License	GPL (>= 2)
Depends	edgeR, R (>= 2.10)
Imports
LinkingTo
Suggests	BiocStyle, knitr
SystemRequirements
Enhances
URL
Depends On Me	RnaSeqSampleSize
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	RnaSeqSampleSizeData_1.10.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/RnaSeqSampleSizeData
Package Short Url	http://bioconductor.org/packages/RnaSeqSampleSizeData/
Package Downloads Report	Download Stats