RnaSeqTutorial

DOI: 10.18129/B9.bioc.RnaSeqTutorial    

RNA-Seq Tutorial (EBI Cambridge UK, October 2011)

Bioconductor version: Release (3.6)

A selection of RNA-Seq data to get familiar with the related Bioconductor core packages and the easyRNASeq package.

Author: Nicolas Delhomme, Ismael Padioleau

Maintainer: Nicolas Delhomme <nicolas.delhomme at umu.se>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RnaSeqTutorial")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RnaSeqTutorial")

 

PDF	R Script	RNA-Seq Tutorial
PDF		Reference Manual
Text		NEWS

Details

biocViews	Drosophila_melanogaster_Data, ExperimentData, RNASeqData
Version	0.16.0
License	Artistic-2.0
Depends	R (>= 3.0.2), methods, easyRNASeq
Imports
LinkingTo
Suggests	Rsamtools, ShortRead, BSgenome.Dmelanogaster.UCSC.dm3, GenomicAlignments, biomaRt, genomeIntervals
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	easyRNASeq
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	RnaSeqTutorial_0.16.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/RnaSeqTutorial
Package Short Url	http://bioconductor.org/packages/RnaSeqTutorial/
Package Downloads Report	Download Stats