dsQTL

DOI: 10.18129/B9.bioc.dsQTL    

dsQTL, data excerpt from Degner et al. 2012 Nature letter

Bioconductor version: Release (3.6)

dsQTL, excerpt from Degner et al. 2012 Nature letter on DNA variants associated with DnaseI hypersensitivity

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("dsQTL")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("dsQTL")

 

PDF	R Script	dsQTL, data excerpt from Degner et al. 2012 Nature letter
PDF		Reference Manual
Text		NEWS

Details

biocViews	BiocViews, DNASeqData, ExperimentData, Genome, NCI, Project1000genomes, SequencingData
Version	0.16.0
License	Artistic-2.0
Depends	R (>= 2.15.0), utils, Biobase, SummarizedExperiment, GGBase(>= 3.31.1)
Imports
LinkingTo
Suggests	GGtools, rtracklayer
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	yriMulti
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	dsQTL_0.16.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/dsQTL
Package Short Url	http://bioconductor.org/packages/dsQTL/
Package Downloads Report	Download Stats