To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowVS")
In most cases, you don't need to download the package archive at all.
flowVS
|
This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see flowVS.
Variance stabilization in flow cytometry (and microarrays)
Bioconductor version: 3.1
Per-channel variance stabilization from a collection of flow cytometry samples by Bertlett test for homogeneity of variances. The approach is applicable to microarrays data as well.
Author: Ariful Azad
Maintainer: Ariful Azad <azadcse at gmail.com>
Citation (from within R,
enter citation("flowVS")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowVS")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowVS")
| R Script | flowVS: Cell population matching and meta-clustering in Flow Cytometry | |
| Reference Manual |
Details
| biocViews | CellBasedAssays, FlowCytometry, Microarray, Software |
| Version | 1.0.0 |
| In Bioconductor since | BioC 3.1 (R-3.2) (1 year) |
| License | Artistic-2.0 |
| Depends | R (>= 3.2), methods, flowCore, flowViz, flowStats |
| Imports | |
| LinkingTo | |
| Suggests | knitr, vsn |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | flowVS_1.0.0.tar.gz |
| Windows Binary | flowVS_1.0.0.zip |
| Mac OS X 10.6 (Snow Leopard) | flowVS_1.0.0.tgz |
| Mac OS X 10.9 (Mavericks) | flowVS_1.0.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/flowVS/tree/release-3.1 |
| Package Short Url | http://bioconductor.org/packages/flowVS/ |
| Package Downloads Report | Download Stats |
Documentation »
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