basilisk.utils

DOI: 10.18129/B9.bioc.basilisk.utils    

This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see basilisk.utils.

Basilisk Installation Utilities

Bioconductor version: 3.12

Implements utilities for installation of the basilisk package, primarily for creation of the underlying Conda instance. This allows us to avoid re-writing the same R code in both the configure script (for centrally administered R installations) and in the lazy installation mechanism (for distributed package binaries). It is highly unlikely that developers - or, heaven forbid, end-users! - will need to interact with this package directly; they should be using the basilisk package instead.

Author: Aaron Lun [aut, cre, cph]

Maintainer: Aaron Lun <infinite.monkeys.with.keyboards at gmail.com>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("basilisk.utils")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("basilisk.utils")

 

HTML	R Script	_basilisk_ installation utilities
PDF		Reference Manual
Text		NEWS

Details

biocViews	Infrastructure, Software
Version	1.2.2
In Bioconductor since	BioC 3.11 (R-4.0) (1 year)
License	GPL-3
Depends
Imports	utils, methods, rappdirs, filelock
LinkingTo
Suggests	knitr, rmarkdown, BiocStyle, testthat, BiocFileCache
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	basilisk
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	basilisk.utils_1.2.2.tar.gz
Windows Binary	basilisk.utils_1.2.2.zip
macOS 10.13 (High Sierra)	basilisk.utils_1.2.2.tgz
Source Repository	git clone https://git.bioconductor.org/packages/basilisk.utils
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/basilisk.utils
Package Short Url	https://bioconductor.org/packages/basilisk.utils/
Package Downloads Report	Download Stats