gaia

DOI: 10.18129/B9.bioc.gaia    

This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see gaia.

GAIA: An R package for genomic analysis of significant chromosomal aberrations.

Bioconductor version: 3.12

This package allows to assess the statistical significance of chromosomal aberrations.

Author: Sandro Morganella et al.

Maintainer: S. Morganella <sandro at ebi.ac.uk>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("gaia")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("gaia")

 

PDF	R Script	gaia
PDF		Reference Manual

Details

biocViews	CopyNumberVariation, Software, aCGH
Version	2.34.0
In Bioconductor since	BioC 2.8 (R-2.13) (10 years)
License	GPL-2
Depends	R (>= 2.10)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	TCGAWorkflow
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	gaia_2.34.0.tar.gz
Windows Binary	gaia_2.34.0.zip
macOS 10.13 (High Sierra)	gaia_2.34.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/gaia
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/gaia
Package Short Url	https://bioconductor.org/packages/gaia/
Package Downloads Report	Download Stats