reactome.db

DOI: 10.18129/B9.bioc.reactome.db    

This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see reactome.db.

A set of annotation maps for reactome

Bioconductor version: 3.12

A set of annotation maps for reactome assembled using data from reactome

Author: Willem Ligtenberg

Maintainer: Willem Ligtenberg <willem at 42analytics.eu>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("reactome.db")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual
Text		NEWS

Details

biocViews	AnnotationData, FunctionalAnnotation
Version	1.74.0
License	CC BY 4.0
Depends	R (>= 2.7.0), methods, AnnotationDbi(>= 1.33.0)
Imports	methods, AnnotationDbi
LinkingTo
Suggests	RSQLite
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	attract, bioCancer, famat, mAPKL, methylGSA, NoRCE, ReactomePA, scTensor, signatureSearch, SMITE
Suggests Me	AnnotationDbi, BioCor, ChIPpeakAnno, FGNet, fgsea, GeneAnswers, MLP, PCAN, safe, simplifyEnrichment
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	reactome.db_1.74.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Package Short Url	https://bioconductor.org/packages/reactome.db/
Package Downloads Report	Download Stats