BeadArrayUseCases

DOI: 10.18129/B9.bioc.BeadArrayUseCases    

This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see BeadArrayUseCases.

Analysing Illumina BeadArray expression data using Bioconductor

Bioconductor version: 3.12

Example data files and use cases for processing Illumina BeadArray expression data using Bioconductor

Author: Mark Dunning, Wei Shi, Andy Lynch, Mike Smith, Matt Ritchie

Maintainer: Mike Smith <grimbough at gmail.com>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BeadArrayUseCases")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BeadArrayUseCases")

 

PDF	R Script	BeadArrayUseCases.pdf
PDF		Reference Manual

Details

biocViews	ExperimentData, MicroarrayData
Version	1.28.0
License	GPL-2
Depends
Imports	beadarray(>= 2.3.18), limma, GEOquery
LinkingTo
Suggests	Biostrings, GenomicRanges, illuminaHumanv1.db, illuminaHumanv2.db, illuminaHumanv3.db
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	BeadArrayUseCases_1.28.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/BeadArrayUseCases
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/BeadArrayUseCases
Package Short Url	https://bioconductor.org/packages/BeadArrayUseCases/
Package Downloads Report	Download Stats